Agentic Target Evidence MCP Server

by athrilio.github.athril/agentic-target-evidencev0.1.4

Read-only biomedical evidence tools for drug-target validation: DepMap, gnomAD, OpenTargets, PubMed…

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Active5d ago

Install Agentic Target Evidence MCP server

claude mcp add agentic-target-evidence -e NCBI_API_KEY='<ncbi-api-key>' -e USPTO_API_KEY='<uspto-api-key>' -- docker run -i --rm -e NCBI_API_KEY -e USPTO_API_KEY ghcr.io/athril/agentic-target-evidence/mcp-gateway:v0.1.4

{
  "mcpServers": {
    "agentic-target-evidence": {
      "command": "docker",
      "args": [
        "run",
        "-i",
        "--rm",
        "-e",
        "NCBI_API_KEY",
        "-e",
        "USPTO_API_KEY",
        "ghcr.io/athril/agentic-target-evidence/mcp-gateway:v0.1.4"
      ],
      "env": {
        "NCBI_API_KEY": "<ncbi-api-key>",
        "USPTO_API_KEY": "<uspto-api-key>"
      }
    }
  }
}

Add to ~/.cursor/mcp.json (global) or .cursor/mcp.json (project).

{
  "mcpServers": {
    "agentic-target-evidence": {
      "command": "docker",
      "args": [
        "run",
        "-i",
        "--rm",
        "-e",
        "NCBI_API_KEY",
        "-e",
        "USPTO_API_KEY",
        "ghcr.io/athril/agentic-target-evidence/mcp-gateway:v0.1.4"
      ],
      "env": {
        "NCBI_API_KEY": "<ncbi-api-key>",
        "USPTO_API_KEY": "<uspto-api-key>"
      }
    }
  }
}

Settings → Developer → Edit Config (claude_desktop_config.json), then restart.

{
  "servers": {
    "agentic-target-evidence": {
      "type": "stdio",
      "command": "docker",
      "args": [
        "run",
        "-i",
        "--rm",
        "-e",
        "NCBI_API_KEY",
        "-e",
        "USPTO_API_KEY",
        "ghcr.io/athril/agentic-target-evidence/mcp-gateway:v0.1.4"
      ],
      "env": {
        "NCBI_API_KEY": "<ncbi-api-key>",
        "USPTO_API_KEY": "<uspto-api-key>"
      }
    }
  }
}

Add to .vscode/mcp.json in your workspace.

{
  "mcpServers": {
    "agentic-target-evidence": {
      "command": "docker",
      "args": [
        "run",
        "-i",
        "--rm",
        "-e",
        "NCBI_API_KEY",
        "-e",
        "USPTO_API_KEY",
        "ghcr.io/athril/agentic-target-evidence/mcp-gateway:v0.1.4"
      ],
      "env": {
        "NCBI_API_KEY": "<ncbi-api-key>",
        "USPTO_API_KEY": "<uspto-api-key>"
      }
    }
  }
}

Add to ~/.codeium/windsurf/mcp_config.json.

Configuration

Variable	Required	Secret	Description
MCP_TRANSPORT	—	—	Run the gateway over stdio (the image defaults to HTTP).
NCBI_API_KEY	—	yes	Optional NCBI E-utilities key; raises the PubMed/ClinVar rate limit from 3 to 10 req/s.
USPTO_API_KEY	—	yes	Optional USPTO Open Data Portal key; the USPTO patent tools return nothing without it.

Freshness

Active — last maintenance signal 5d ago. The newest of the signals below sets the band.

Last commit (default branch)
2026-10-05 · 5d ago · GitHub
Latest release
2026-10-05 · 5d ago · GitHub · v0.1.4
Package published
no data · npm/PyPI
Registry entry updated
2026-10-05 · 5d ago · official registry · v0.1.4

FAQ

›How do I install the Agentic Target Evidence MCP server in Claude Code?

Run: claude mcp add agentic-target-evidence -e NCBI_API_KEY='<ncbi-api-key>' -e USPTO_API_KEY='<uspto-api-key>' -- docker run -i --rm -e NCBI_API_KEY -e USPTO_API_KEY ghcr.io/athril/agentic-target-evidence/mcp-gateway:v0.1.4. For Cursor, VS Code, Claude Desktop and Windsurf, use the install tabs above.

›Does Agentic Target Evidence require an API key?

Yes. It expects NCBI_API_KEY, USPTO_API_KEY, of which 2 are secrets.

›Can I use Agentic Target Evidence as a remote (hosted) MCP server?

No hosted endpoint is published; it runs locally over stdio.

›Is Agentic Target Evidence in the official MCP registry?

Yes, as io.github.athril/agentic-target-evidence.