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mcp/skillhub

phylokit MCP Server

by musharnaio.github.musharna/phylokit-mcpv0.6.0

Phylogenetic inference via IQ-TREE 3 — never returns a topology without its support

0Pythonstdioofficial registry

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security

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cold start

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freshness

Active8d ago

Install phylokit MCP server

Install in Claude Code

claude mcp add phylokit -- uvx phylokit-mcp

Configuration

VariableRequiredSecretDescription
OMP_NUM_THREADS——Pinned so inference is reproducible; overriding it makes IQ-TREE runs non-deterministic.
MKL_NUM_THREADS——Pinned alongside OMP_NUM_THREADS for the same reproducibility reason.

Freshness

Active — last maintenance signal 8d ago. The newest of the signals below sets the band.

  1. Last commit (default branch)

    2026-10-01 · 8d ago · GitHub

  2. Latest release

    2026-09-26 · 14d ago · GitHub · v0.6.0

  3. Package published

    no data · npm/PyPI

  4. Registry entry updated

    2026-09-26 · 14d ago · official registry · v0.6.0

FAQ

›How do I install the phylokit MCP server in Claude Code?

Run: claude mcp add phylokit -- uvx phylokit-mcp. For Cursor, VS Code, Claude Desktop and Windsurf, use the install tabs above.

›Does phylokit require an API key?

No required environment variables are declared in its published metadata.

›Can I use phylokit as a remote (hosted) MCP server?

No hosted endpoint is published; it runs locally over stdio.

›Is phylokit in the official MCP registry?

Yes, as io.github.musharna/phylokit-mcp.