Ncbi Datasets MCP Server
by pipeworx-ioio.github.pipeworx-io/ncbi-datasetsv0.1.1
NCBI Datasets — the US National Library of Medicine's genome, gene and taxonomy reference service…
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Active13d ago
Install Ncbi Datasets MCP server
Install in Claude Code
claude mcp add ncbi-datasets -- npx -y @pipeworx/mcp-ncbi-datasetsInstall in Cursor
{
"mcpServers": {
"ncbi-datasets": {
"command": "npx",
"args": [
"-y",
"@pipeworx/mcp-ncbi-datasets"
]
}
}
}Add to ~/.cursor/mcp.json (global) or .cursor/mcp.json (project).
Install in Claude Desktop
{
"mcpServers": {
"ncbi-datasets": {
"command": "npx",
"args": [
"-y",
"@pipeworx/mcp-ncbi-datasets"
]
}
}
}Settings → Developer → Edit Config (claude_desktop_config.json), then restart.
Install in VS Code
{
"servers": {
"ncbi-datasets": {
"type": "stdio",
"command": "npx",
"args": [
"-y",
"@pipeworx/mcp-ncbi-datasets"
]
}
}
}Add to .vscode/mcp.json in your workspace.
Install in Windsurf
{
"mcpServers": {
"ncbi-datasets": {
"command": "npx",
"args": [
"-y",
"@pipeworx/mcp-ncbi-datasets"
]
}
}
}Add to ~/.codeium/windsurf/mcp_config.json.
Remote endpoints
- streamable-http
https://gateway.pipeworx.io/ncbi-datasets/mcp
Freshness
Active — last maintenance signal 13d ago. The newest of the signals below sets the band.
Last commit (default branch)
2026-09-26 · 13d ago · GitHub
Latest release
no data · GitHub
Package published
no data · npm/PyPI
Registry entry updated
2026-09-26 · 13d ago · official registry · v0.1.1
FAQ
›How do I install the Ncbi Datasets MCP server in Claude Code?
Run: claude mcp add ncbi-datasets -- npx -y @pipeworx/mcp-ncbi-datasets. For Cursor, VS Code, Claude Desktop and Windsurf, use the install tabs above.
›Does Ncbi Datasets require an API key?
No required environment variables are declared in its published metadata.
›Can I use Ncbi Datasets as a remote (hosted) MCP server?
Yes — it offers both a hosted endpoint and a local stdio package.
›Is Ncbi Datasets in the official MCP registry?
Yes, as io.github.pipeworx-io/ncbi-datasets.