BioHarbor MCP Server
by danielluo2io.github.danielLuo2/bioharborv0.1.4
Run real bioinformatics from your AI agent. Reliable, reproducible, on your own GPUs.
context tax
queued
security
queued
cold start
queued
freshness
Active1d ago
Install BioHarbor MCP server
Install in Claude Code
claude mcp add bioharbor -- uvx bioharbor serveInstall in Cursor
{
"mcpServers": {
"bioharbor": {
"command": "uvx",
"args": [
"bioharbor",
"serve"
]
}
}
}Add to ~/.cursor/mcp.json (global) or .cursor/mcp.json (project).
Install in Claude Desktop
{
"mcpServers": {
"bioharbor": {
"command": "uvx",
"args": [
"bioharbor",
"serve"
]
}
}
}Settings → Developer → Edit Config (claude_desktop_config.json), then restart.
Install in VS Code
{
"servers": {
"bioharbor": {
"type": "stdio",
"command": "uvx",
"args": [
"bioharbor",
"serve"
]
}
}
}Add to .vscode/mcp.json in your workspace.
Install in Windsurf
{
"mcpServers": {
"bioharbor": {
"command": "uvx",
"args": [
"bioharbor",
"serve"
]
}
}
}Add to ~/.codeium/windsurf/mcp_config.json.
Freshness
Active — last maintenance signal 1d ago. The newest of the signals below sets the band.
Last commit (default branch)
2026-10-08 · 1d ago · GitHub
Latest release
2026-10-07 · 3d ago · GitHub · v0.1.4
Package published
no data · npm/PyPI
Registry entry updated
2026-10-07 · 3d ago · official registry · v0.1.4
FAQ
›How do I install the BioHarbor MCP server in Claude Code?
Run: claude mcp add bioharbor -- uvx bioharbor serve. For Cursor, VS Code, Claude Desktop and Windsurf, use the install tabs above.
›Does BioHarbor require an API key?
No required environment variables are declared in its published metadata.
›Can I use BioHarbor as a remote (hosted) MCP server?
No hosted endpoint is published; it runs locally over stdio.
›Is BioHarbor in the official MCP registry?
Yes, as io.github.danielLuo2/bioharbor.